Harshil Patel b236d0c834 Update main.nf		2020-12-17 10:24:01 +00:00
..
bwa	Add --singularity_pull_docker_container to module yml	2020-12-14 00:34:24 +00:00
deeptools	Update all other modules	2020-12-14 00:05:48 +00:00
fastqc	Add --singularity_pull_docker_container to module yml	2020-12-14 00:34:24 +00:00
gffread	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
hisat2	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
homer/annotatepeaks	Update all other modules	2020-12-14 00:05:48 +00:00
lib	Update functions script	2020-09-10 15:59:26 +01:00
macs2/callpeak	Update all other modules	2020-12-14 00:05:48 +00:00
multiqc	Add --singularity_pull_docker_container to module yml	2020-12-14 00:34:24 +00:00
phantompeakqualtools	Update all other modules	2020-12-14 00:05:48 +00:00
picard	Add --singularity_pull_docker_container to module yml	2020-12-14 00:34:24 +00:00
preseq/lcextrap	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
qualimap/rnaseq	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
rsem	Update main.nf	2020-12-17 10:24:01 +00:00
rseqc	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
salmon	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
samtools	Add --singularity_pull_docker_container to module yml	2020-12-14 00:34:24 +00:00
SOFTWARE/TOOL	Add --singularity_pull_docker_container to module yml	2020-12-14 00:34:24 +00:00
sortmerna	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
star	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
stringtie	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
subread/featurecounts	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
trimgalore	Add --singularity_pull_docker_container to module yml	2020-12-14 00:34:24 +00:00
ucsc/bedgraphtobigwig	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00
umitools	Add singularity containers for rnaseq pipeline modules	2020-12-13 23:41:53 +00:00