mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 05:43:08 +00:00
f080015754
* style: Add prettier config files * build: Add prettier vscode extension * ci: Replace markdownlint and yamllint with prettier * style: Run prettier * style: Use indent of 2 for markdown as well https://github.com/nf-core/tools/pull/1470#issuecomment-1071028358 * style: Fix indent * style: Let editorconfig take over tab widths * style: yaml => yml * ci: Run prettier once Co-authored-by: Phil Ewels <phil.ewels@scilifelab.se> Co-authored-by: Phil Ewels <phil.ewels@scilifelab.se>
37 lines
1 KiB
YAML
37 lines
1 KiB
YAML
name: amrfinderplus_update
|
|
description: Identify antimicrobial resistance in gene or protein sequences
|
|
keywords:
|
|
- bacteria
|
|
- fasta
|
|
- antibiotic resistance
|
|
tools:
|
|
- amrfinderplus:
|
|
description: AMRFinderPlus finds antimicrobial resistance and other genes in protein or nucleotide sequences.
|
|
homepage: https://github.com/ncbi/amr/wiki
|
|
documentation: https://github.com/ncbi/amr/wiki
|
|
tool_dev_url: https://github.com/ncbi/amr
|
|
doi: "10.1038/s41598-021-91456-0"
|
|
licence: ["Public Domain"]
|
|
|
|
input:
|
|
- input_not_required:
|
|
type: null
|
|
description: module does not have an input
|
|
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
- db:
|
|
type: file
|
|
description: The latest AMRFinder+ database in a compressed tarball
|
|
pattern: "*.tar.gz"
|
|
|
|
authors:
|
|
- "@rpetit3"
|