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https://github.com/MillironX/nf-core_modules.git
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39 lines
1.7 KiB
YAML
39 lines
1.7 KiB
YAML
- name: gatk4 indexfeaturefile test_gatk4_indexfeaturefile_bed
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command: nextflow run tests/modules/gatk4/indexfeaturefile -entry test_gatk4_indexfeaturefile_bed -c tests/config/nextflow.config -c ./tests/modules/gatk4/indexfeaturefile/nextflow.config
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tags:
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- gatk4
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- gatk4/indexfeaturefile
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files:
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- path: output/gatk4/genome.bed.idx
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- name: gatk4 indexfeaturefile test_gatk4_indexfeaturefile_bed_gz
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command: nextflow run tests/modules/gatk4/indexfeaturefile -entry test_gatk4_indexfeaturefile_bed_gz -c tests/config/nextflow.config -c ./tests/modules/gatk4/indexfeaturefile/nextflow.config
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tags:
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- gatk4
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- gatk4/indexfeaturefile
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files:
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- path: output/gatk4/genome.bed.gz.tbi
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md5sum: 4bc51e2351a6e83f20e13be75861f941
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- path: output/gatk4/versions.yml
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md5sum: 9eb24dc17c96971b7991b3e154279aa7
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- name: gatk4 indexfeaturefile test_gatk4_indexfeaturefile_vcf
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command: nextflow run tests/modules/gatk4/indexfeaturefile -entry test_gatk4_indexfeaturefile_vcf -c tests/config/nextflow.config -c ./tests/modules/gatk4/indexfeaturefile/nextflow.config
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tags:
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- gatk4
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- gatk4/indexfeaturefile
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files:
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- path: output/gatk4/test.genome.vcf.idx
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- path: output/gatk4/versions.yml
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md5sum: f76543e715342bf1fcdeb20385e01fe9
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- name: gatk4 indexfeaturefile test_gatk4_indexfeaturefile_vcf_gz
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command: nextflow run tests/modules/gatk4/indexfeaturefile -entry test_gatk4_indexfeaturefile_vcf_gz -c tests/config/nextflow.config
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tags:
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- gatk4
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- gatk4/indexfeaturefile
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files:
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- path: output/gatk4/test.genome.vcf.gz.tbi
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md5sum: fedd68eaddf8d31257853d9da8325bd3
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- path: output/gatk4/versions.yml
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md5sum: a5d988cf62648f700ffac7257e72b2c0
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