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* feat added vcflib/vcfbreakmulti module * fix comments review * Update modules/vcflib/vcfbreakmulti/main.nf Co-authored-by: Anders Jemt <jemten@users.noreply.github.com> * Update modules/vcflib/vcfbreakmulti/main.nf Co-authored-by: Anders Jemt <jemten@users.noreply.github.com> * fix change required by reviewer * fix commiting pytest_modules.yml * fix version * fix version_ * Update tests/modules/vcflib/vcfbreakmulti/test.yml Co-authored-by: nvnieuwk <101190534+nvnieuwk@users.noreply.github.com> * fix undid previous commit * fix test * Update tests/modules/vcflib/vcfbreakmulti/test.yml Co-authored-by: nvnieuwk <101190534+nvnieuwk@users.noreply.github.com> * Update tests/modules/vcflib/vcfbreakmulti/test.yml Co-authored-by: nvnieuwk <101190534+nvnieuwk@users.noreply.github.com> Co-authored-by: Anders Jemt <jemten@users.noreply.github.com> Co-authored-by: nvnieuwk <101190534+nvnieuwk@users.noreply.github.com>
16 lines
476 B
Text
16 lines
476 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { VCFLIB_VCFBREAKMULTI } from '../../../../modules/vcflib/vcfbreakmulti/main.nf'
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workflow test_vcflib_vcfbreakmulti {
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input = [
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[ id:'test', single_end:false ], // meta map
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file(params.test_data['sarscov2']['illumina']['test_vcf_gz'], checkIfExists: true),
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file(params.test_data['sarscov2']['illumina']['test_vcf_gz_tbi'], checkIfExists: true)
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]
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VCFLIB_VCFBREAKMULTI ( input )
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}
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