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43 lines
1.1 KiB
YAML
43 lines
1.1 KiB
YAML
name: sourmash_sketch
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description: Create a signature (a hash sketch) of a sequence using sourmash
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keywords:
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- hash sketch
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- signature
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tools:
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- sourmash:
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description: Compute and compare MinHash signatures for DNA data sets.
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homepage: https://sourmash.readthedocs.io/
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documentation: https://sourmash.readthedocs.io/
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tool_dev_url: https://github.com/dib-lab/sourmash
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doi: "10.1186/s13059-016-0997-x"
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licence: ["BSD-3-clause"]
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- sequence:
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type: file
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description: FastA file containing (genomic) sequence data
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pattern: "*.{fna,fa,fasta}"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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- signatures:
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type: file
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description: MinHash signature of the given sequence
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pattern: "*.{sig}"
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authors:
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- "@Midnighter"
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