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7111e571cc
* fix(preseq): Update lcextrap file name * chore(preseq): Bump lcextrap image * feat: Initialize preseq c_curve * docs(preseq): Update documentation
25 lines
618 B
Text
25 lines
618 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PRESEQ_CCURVE } from '../../../../modules/preseq/ccurve/main.nf'
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workflow test_preseq_ccurve_single_end {
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input = [
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[ id:'test', single_end:false ], // meta map
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file(params.test_data['sarscov2']['illumina']['test_paired_end_bam'], checkIfExists: true)
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]
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PRESEQ_CCURVE ( input )
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}
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workflow test_preseq_ccurve_paired_end {
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input = [
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[ id:'test', single_end:false ], // meta map
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file(params.test_data['sarscov2']['illumina']['test_paired_end_bam'], checkIfExists: true)
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]
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PRESEQ_CCURVE ( input )
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}
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