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28 lines
724 B
Text
28 lines
724 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { MERYL_COUNT } from '../../../../modules/meryl/count/main.nf'
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workflow test_meryl_count_single_end {
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input = [
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[ id:'test' , single_end: true ], // meta map
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file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true)
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]
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MERYL_COUNT ( input )
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}
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workflow test_meryl_count_paired_end {
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input = [
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[ id:'test' , single_end: false ], // meta map
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[
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file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true),
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file(params.test_data['sarscov2']['illumina']['test_2_fastq_gz'], checkIfExists: true)
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]
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]
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MERYL_COUNT ( input )
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}
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