mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
29 lines
891 B
YAML
29 lines
891 B
YAML
name: graphmap2_index
|
|
description: A versatile pairwise aligner for genomic and spliced nucleotide sequences
|
|
keywords:
|
|
- index
|
|
- fasta
|
|
- reference
|
|
tools:
|
|
- graphmap2:
|
|
description: |
|
|
A versatile pairwise aligner for genomic and spliced nucleotide sequences.
|
|
homepage: https://github.com/lbcb-sci/graphmap2
|
|
documentation: https://github.com/lbcb-sci/graphmap2#graphmap2---a-highly-sensitive-and-accurate-mapper-for-long-error-prone-reads
|
|
input:
|
|
- fasta:
|
|
type: file
|
|
description: |
|
|
Reference database in FASTA format.
|
|
output:
|
|
- gmidx:
|
|
type: file
|
|
description: Graphmap2 fasta index in gmidx format
|
|
pattern: "*.gmidx"
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
authors:
|
|
- "@yuukiiwa"
|
|
- "@drpatelh"
|