mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 19:18:17 +00:00
cd22a76c78
* correct md5sum for updated star/samtools * merge changes in align test.yml * update md5sum for star genomegenerate * update md5sum for star align
60 lines
2.6 KiB
YAML
60 lines
2.6 KiB
YAML
- name: star genomegenerate test_star_genomegenerate
|
|
command: nextflow run ./tests/modules/star/genomegenerate -entry test_star_genomegenerate -c ./tests/config/nextflow.config -c ./tests/modules/star/genomegenerate/nextflow.config
|
|
tags:
|
|
- star
|
|
- star/genomegenerate
|
|
files:
|
|
- path: output/star/star/Genome
|
|
md5sum: a654229fbca6071dcb6b01ce7df704da
|
|
- path: output/star/star/Log.out
|
|
- path: output/star/star/SA
|
|
md5sum: 8c3edc46697b72c9e92440d4cf43506c
|
|
- path: output/star/star/SAindex
|
|
md5sum: d0fbf2789ee1e9f60c352ba3655d9de4
|
|
- path: output/star/star/chrLength.txt
|
|
md5sum: c81f40f27e72606d7d07097c1d56a5b5
|
|
- path: output/star/star/chrName.txt
|
|
md5sum: 5ae68a67b70976ee95342a7451cb5af1
|
|
- path: output/star/star/chrNameLength.txt
|
|
md5sum: b190587cae0531f3cf25552d8aa674db
|
|
- path: output/star/star/chrStart.txt
|
|
md5sum: 8d3291e6bcdbe9902fbd7c887494173f
|
|
- path: output/star/star/exonGeTrInfo.tab
|
|
md5sum: d04497f69d6ef889efd4d34fe63edcc4
|
|
- path: output/star/star/exonInfo.tab
|
|
md5sum: 0d560290fab688b7268d88d5494bf9fe
|
|
- path: output/star/star/geneInfo.tab
|
|
md5sum: 8b608537307443ffaee4927d2b428805
|
|
- path: output/star/star/genomeParameters.txt
|
|
md5sum: 5a1ec027e575c3d7c1851e6b80fb8c5d
|
|
- path: output/star/star/sjdbInfo.txt
|
|
md5sum: 5690ea9d9f09f7ff85b7fd47bd234903
|
|
- path: output/star/star/sjdbList.fromGTF.out.tab
|
|
md5sum: 8760c33e966dad0b39f440301ebbdee4
|
|
- path: output/star/star/sjdbList.out.tab
|
|
md5sum: 9e4f991abbbfeb3935a2bb21b9e258f1
|
|
- path: output/star/star/transcriptInfo.tab
|
|
md5sum: 0c3a5adb49d15e5feff81db8e29f2e36
|
|
|
|
- name: star genomegenerate test_star_genomegenerate stub
|
|
command: nextflow run ./tests/modules/star/genomegenerate -entry test_star_genomegenerate -c ./tests/config/nextflow.config -c ./tests/modules/star/genomegenerate/nextflow.config -stub-run
|
|
tags:
|
|
- star
|
|
- star/genomegenerate
|
|
files:
|
|
- path: output/star/star/Genome
|
|
- path: output/star/star/Log.out
|
|
- path: output/star/star/SA
|
|
- path: output/star/star/SAindex
|
|
- path: output/star/star/chrLength.txt
|
|
- path: output/star/star/chrName.txt
|
|
- path: output/star/star/chrNameLength.txt
|
|
- path: output/star/star/chrStart.txt
|
|
- path: output/star/star/exonGeTrInfo.tab
|
|
- path: output/star/star/exonInfo.tab
|
|
- path: output/star/star/geneInfo.tab
|
|
- path: output/star/star/genomeParameters.txt
|
|
- path: output/star/star/sjdbInfo.txt
|
|
- path: output/star/star/sjdbList.fromGTF.out.tab
|
|
- path: output/star/star/sjdbList.out.tab
|
|
- path: output/star/star/transcriptInfo.tab
|