mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
043a7d1e3c
* remove deprecated test tags * fix bowtie, gatk4/applybsqr * fix gatk4 baserecalibrator * fixed shovill * fixed yara/mapper * fixed kallistobustools/ref paths
17 lines
621 B
YAML
17 lines
621 B
YAML
- name: gatk4 mergevcfs test_gatk4_mergevcfs
|
|
command: nextflow run tests/software/gatk4/mergevcfs -entry test_gatk4_mergevcfs -c tests/config/nextflow.config
|
|
tags:
|
|
- gatk4/mergevcfs
|
|
- gatk4
|
|
files:
|
|
- path: output/gatk4/test.merged.vcf.gz
|
|
md5sum: ff48f175e26db2d4b2957762f6d1c715
|
|
|
|
- name: gatk4 mergevcfs test_gatk4_mergevcfs_refdict
|
|
command: nextflow run tests/software/gatk4/mergevcfs -entry test_gatk4_mergevcfs_refdict -c tests/config/nextflow.config
|
|
tags:
|
|
- gatk4/mergevcfs
|
|
- gatk4
|
|
files:
|
|
- path: output/gatk4/test.merged.vcf.gz
|
|
md5sum: ff48f175e26db2d4b2957762f6d1c715
|