nf-core_modules/tests/software/bcftools/mpileup/test.yml
Edmund Miller a3684d9594
Lint modules ci (#389)
* ci: Add modules lint step

Moved it ahead of the nextflow install so ideally it'll fail before we
bother doing any more setup

* ci: _ => /

* Update tests/config/pytest_software.yml

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-04-08 09:10:52 +01:00

12 lines
496 B
YAML

- name: bcftools mpileup test_bcftools_mpileup
command: nextflow run tests/software/bcftools/mpileup -entry test_bcftools_mpileup -c tests/config/nextflow.config
tags:
- bcftools/mpileup
- bcftools
files:
- path: output/bcftools/test.bcftools_stats.txt
md5sum: 2d506e32837a53a01fea0fc90402632a
- path: output/bcftools/test.vcf.gz.tbi
md5sum: 11d90b5b35e4adf6b44fc53bec93bed3
- path: output/bcftools/test.vcf.gz
md5sum: 2cf273a9fa3784383799b6b24df2f88c