nf-core_modules/tests/software/fastp/test.yml

27 lines
1,008 B
YAML

- name: fastp single-end
command: nextflow run ./tests/software/fastp -entry test_fastp_single_end -c ./tests/config/nextflow.config
tags:
- fastp
- fastp_single_end
files:
- path: ./output/fastp/test.fastp.json
md5sum: b81d53bfa5c1553bed89f6475edcf437
- path: ./output/fastp/test.trim.fastq.gz
md5sum: 2f5516df477b123e3f78adb67effa3bc
- path: ./output/fastp/test.fastp.log
- path: ./output/fastp/test.fastp.html
- name: fastp paired-end
command: nextflow run ./tests/software/fastp -entry test_fastp_paired_end -c ./tests/config/nextflow.config
tags:
- fastp
- fastp_paired_end
files:
- path: ./output/fastp/test.fastp.html
- path: ./output/fastp/test.fastp.json
md5sum: 40db7fcbed478b0a96a1c5c1bb5f737b
- path: ./output/fastp/test.fastp.log
- path: ./output/fastp/test_1.trim.fastq.gz
md5sum: c8844c05194b50ae368e6825e997aa7f
- path: ./output/fastp/test_2.trim.fastq.gz
md5sum: 9238b07bb1609e939be7c8889b72c209