mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 12:43:09 +00:00
21 lines
881 B
YAML
21 lines
881 B
YAML
- name: gatk4 applyvqsr test_gatk4_applyvqsr
|
|
command: nextflow run tests/modules/gatk4/applyvqsr -entry test_gatk4_applyvqsr -c tests/config/nextflow.config -c ./tests/modules/gatk4/applyvqsr/nextflow.config
|
|
tags:
|
|
- gatk4/applyvqsr
|
|
- gatk4
|
|
files:
|
|
- path: output/gatk4/test.vcf.gz
|
|
- path: output/gatk4/test.vcf.gz.tbi
|
|
- path: output/gatk4/versions.yml
|
|
md5sum: 524a78cdfa56c8b09a4ff3f4cb278261
|
|
|
|
- name: gatk4 applyvqsr test_gatk4_applyvqsr_allele_specific
|
|
command: nextflow run tests/modules/gatk4/applyvqsr -entry test_gatk4_applyvqsr_allele_specific -c tests/config/nextflow.config -c ./tests/modules/gatk4/applyvqsr/nextflow.config
|
|
tags:
|
|
- gatk4/applyvqsr
|
|
- gatk4
|
|
files:
|
|
- path: output/gatk4/test.vcf.gz
|
|
- path: output/gatk4/test.vcf.gz.tbi
|
|
- path: output/gatk4/versions.yml
|
|
md5sum: 7a3c6e97628bd1f5f4e7fd429bf74a8e
|