mirror of
https://github.com/MillironX/nf-core_modules.git
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796dbb573e
* Remove old nextclade module * Add nextclade/datasetget and nextclade/run modules * Fix ECLint * Add reference and tag as inputs to datasetget module * Fix tests * Adjust spacing
20 lines
No EOL
964 B
YAML
20 lines
No EOL
964 B
YAML
- name: nextclade datasetget
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command: nextflow run ./tests/modules/nextclade/datasetget -entry test_nextclade_datasetget -c ./tests/config/nextflow.config -c ./tests/modules/nextclade/datasetget/nextflow.config
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tags:
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- nextclade
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- nextclade/datasetget
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files:
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- path: output/nextclade/sars-cov-2/genemap.gff
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md5sum: 21ebebfd0f416eeb959e55ebffd808e8
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- path: output/nextclade/sars-cov-2/primers.csv
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md5sum: 5990c3483bf66ce607aeb90a44e7ef2e
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- path: output/nextclade/sars-cov-2/qc.json
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md5sum: 018fa0c0b0d2e824954e37e01495d549
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- path: output/nextclade/sars-cov-2/reference.fasta
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md5sum: c7ce05f28e4ec0322c96f24e064ef55c
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- path: output/nextclade/sars-cov-2/sequences.fasta
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md5sum: 41129d255b99e0e92bdf20e866b99a1b
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- path: output/nextclade/sars-cov-2/tag.json
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md5sum: 2f6d8e806d9064571ee4188ef1304c9c
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- path: output/nextclade/sars-cov-2/tree.json
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md5sum: f8fb33ed62b59142ac20998eb599df6c |