mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 15:52:05 +00:00
17 lines
465 B
Text
17 lines
465 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { FASTK_FASTK } from '../../../../modules/fastk/fastk/main.nf'
|
|
include { FASTK_HISTEX } from '../../../../modules/fastk/histex/main.nf'
|
|
|
|
workflow test_fastk_histex {
|
|
|
|
input = [
|
|
[ id:'test' , single_end: true ], // meta map
|
|
file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true)
|
|
]
|
|
|
|
FASTK_FASTK ( input )
|
|
FASTK_HISTEX ( FASTK_FASTK.out.hist )
|
|
}
|