nf-core_modules/software/bedtools/sloprefseq/test_main.nf
sruthipsuresh fefbdb9893 Created test file for checking code.
Still need to add parameters map and chrom sizes path.
2021-01-29 23:17:44 -06:00

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#!/usr/bin/env nextflow
nextflow.preview.dsl = 2
params.out_dir = "test_output"
params.upstream = 1
params.downstream = 10
include BEDTOOLS_SLOPEREFSEQ from '../main.nf' params(params)
// Define input channels
ch_input_1 = Channel.fromPath('./tests/data/bed/A.bed')
// ch_input_2 = Channel.fromPath('./tests/data/bed/B.bed')
def additional_params_map = [:]
// Run the workflow
workflow {
BEDTOOLS_SLOPEREFSEQ(ch_input_1, additional_params_map)
}