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fefbdb9893
Still need to add parameters map and chrom sizes path.
19 lines
455 B
Text
19 lines
455 B
Text
#!/usr/bin/env nextflow
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nextflow.preview.dsl = 2
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params.out_dir = "test_output"
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params.upstream = 1
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params.downstream = 10
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include BEDTOOLS_SLOPEREFSEQ from '../main.nf' params(params)
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// Define input channels
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ch_input_1 = Channel.fromPath('./tests/data/bed/A.bed')
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// ch_input_2 = Channel.fromPath('./tests/data/bed/B.bed')
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def additional_params_map = [:]
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// Run the workflow
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workflow {
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BEDTOOLS_SLOPEREFSEQ(ch_input_1, additional_params_map)
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}
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