commit 861d4911104651672a5aca733d20f74e8db4c656
Author: Thomas A. Christensen II <25492070+MillironX@users.noreply.github.com>
Date:   Sun Dec 8 17:18:53 2024 -0600

    initial commit

diff --git a/flake.lock b/flake.lock
new file mode 100644
index 0000000..a95ef8f
--- /dev/null
+++ b/flake.lock
@@ -0,0 +1,131 @@
+{
+  "nodes": {
+    "agenix": {
+      "inputs": {
+        "darwin": "darwin",
+        "home-manager": "home-manager",
+        "nixpkgs": [
+          "nixpkgs"
+        ],
+        "systems": "systems"
+      },
+      "locked": {
+        "lastModified": 1723293904,
+        "narHash": "sha256-b+uqzj+Wa6xgMS9aNbX4I+sXeb5biPDi39VgvSFqFvU=",
+        "owner": "ryantm",
+        "repo": "agenix",
+        "rev": "f6291c5935fdc4e0bef208cfc0dcab7e3f7a1c41",
+        "type": "github"
+      },
+      "original": {
+        "owner": "ryantm",
+        "repo": "agenix",
+        "type": "github"
+      }
+    },
+    "darwin": {
+      "inputs": {
+        "nixpkgs": [
+          "agenix",
+          "nixpkgs"
+        ]
+      },
+      "locked": {
+        "lastModified": 1700795494,
+        "narHash": "sha256-gzGLZSiOhf155FW7262kdHo2YDeugp3VuIFb4/GGng0=",
+        "owner": "lnl7",
+        "repo": "nix-darwin",
+        "rev": "4b9b83d5a92e8c1fbfd8eb27eda375908c11ec4d",
+        "type": "github"
+      },
+      "original": {
+        "owner": "lnl7",
+        "ref": "master",
+        "repo": "nix-darwin",
+        "type": "github"
+      }
+    },
+    "home-manager": {
+      "inputs": {
+        "nixpkgs": [
+          "agenix",
+          "nixpkgs"
+        ]
+      },
+      "locked": {
+        "lastModified": 1703113217,
+        "narHash": "sha256-7ulcXOk63TIT2lVDSExj7XzFx09LpdSAPtvgtM7yQPE=",
+        "owner": "nix-community",
+        "repo": "home-manager",
+        "rev": "3bfaacf46133c037bb356193bd2f1765d9dc82c1",
+        "type": "github"
+      },
+      "original": {
+        "owner": "nix-community",
+        "repo": "home-manager",
+        "type": "github"
+      }
+    },
+    "home-manager_2": {
+      "inputs": {
+        "nixpkgs": [
+          "nixpkgs"
+        ]
+      },
+      "locked": {
+        "lastModified": 1733572789,
+        "narHash": "sha256-zjO6m5BqxXIyjrnUziAzk4+T4VleqjstNudSqWcpsHI=",
+        "owner": "nix-community",
+        "repo": "home-manager",
+        "rev": "c7ffc9727d115e433fd884a62dc164b587ff651d",
+        "type": "github"
+      },
+      "original": {
+        "owner": "nix-community",
+        "ref": "release-24.11",
+        "repo": "home-manager",
+        "type": "github"
+      }
+    },
+    "nixpkgs": {
+      "locked": {
+        "lastModified": 1733412085,
+        "narHash": "sha256-FillH0qdWDt/nlO6ED7h4cmN+G9uXwGjwmCnHs0QVYM=",
+        "owner": "nixos",
+        "repo": "nixpkgs",
+        "rev": "4dc2fc4e62dbf62b84132fe526356fbac7b03541",
+        "type": "github"
+      },
+      "original": {
+        "owner": "nixos",
+        "ref": "nixos-24.11",
+        "repo": "nixpkgs",
+        "type": "github"
+      }
+    },
+    "root": {
+      "inputs": {
+        "agenix": "agenix",
+        "home-manager": "home-manager_2",
+        "nixpkgs": "nixpkgs"
+      }
+    },
+    "systems": {
+      "locked": {
+        "lastModified": 1681028828,
+        "narHash": "sha256-Vy1rq5AaRuLzOxct8nz4T6wlgyUR7zLU309k9mBC768=",
+        "owner": "nix-systems",
+        "repo": "default",
+        "rev": "da67096a3b9bf56a91d16901293e51ba5b49a27e",
+        "type": "github"
+      },
+      "original": {
+        "owner": "nix-systems",
+        "repo": "default",
+        "type": "github"
+      }
+    }
+  },
+  "root": "root",
+  "version": 7
+}
diff --git a/flake.nix b/flake.nix
new file mode 100644
index 0000000..f4c8e80
--- /dev/null
+++ b/flake.nix
@@ -0,0 +1,34 @@
+{
+  description = "Home Manager configuration of millironx";
+
+  inputs = {
+    # Specify the source of Home Manager and Nixpkgs.
+    nixpkgs.url = "github:nixos/nixpkgs/nixos-24.11";
+    home-manager = {
+      url = "github:nix-community/home-manager/release-24.11";
+      inputs.nixpkgs.follows = "nixpkgs";
+    };
+    agenix = {
+      url = "github:ryantm/agenix";
+      inputs.nixpkgs.follows = "nixpkgs";
+    };
+  };
+
+  outputs = { nixpkgs, home-manager, agenix, ... }:
+    let
+      system = "aarch64-darwin";
+      pkgs = nixpkgs.legacyPackages.${system};
+    in {
+      homeConfigurations."millironx" =
+        home-manager.lib.homeManagerConfiguration {
+          inherit pkgs;
+
+          # Specify your home configuration modules here, for example,
+          # the path to your home.nix.
+          modules = [ ./home.nix agenix.homeManagerModules.default ];
+
+          # Optionally use extraSpecialArgs
+          # to pass through arguments to home.nix
+        };
+    };
+}
diff --git a/home.nix b/home.nix
new file mode 100644
index 0000000..b81e9f2
--- /dev/null
+++ b/home.nix
@@ -0,0 +1,284 @@
+{ config, pkgs, ... }:
+
+{
+  # Home Manager needs a bit of information about you and the paths it should
+  # manage.
+  home.username = "millironx";
+  home.homeDirectory = "/Users/millironx";
+
+  # This value determines the Home Manager release that your configuration is
+  # compatible with. This helps avoid breakage when a new Home Manager release
+  # introduces backwards incompatible changes.
+  #
+  # You should not change this value, even if you update Home Manager. If you do
+  # want to update the value, then make sure to first check the Home Manager
+  # release notes.
+  home.stateVersion = "23.11"; # Please read the comment before changing.
+
+  # The home.packages option allows you to install Nix packages into your
+  # environment.
+  home.packages = with pkgs; [
+    act
+    asitop
+    bat
+    cowsay
+    direnv
+    ffmpeg
+    figlet
+    fortune
+    gh
+    gitflow
+    git-absorb
+    gnugrep
+    gnupg
+    gnused
+    htop
+    inkscape-with-extensions
+    jq
+    lapce
+    lsd
+    lynx
+    most
+    neovide
+    nil
+    nixd
+    nixfmt
+    pandoc
+    pinentry_mac
+    pipx
+    python3
+    quarto
+    shellcheck
+    sketchybar-app-font
+    sqlitebrowser
+    texlive.combined.scheme-full
+    woodpecker-cli
+    yt-dlp
+    zulu17
+
+    # # It is sometimes useful to fine-tune packages, for example, by applying
+    # # overrides. You can do that directly here, just don't forget the
+    # # parentheses. Maybe you want to install Nerd Fonts with a limited number of
+    # # fonts?
+    (pkgs.nerdfonts.override {
+      fonts = [ "FiraCode" "Hack" "Meslo" "NerdFontsSymbolsOnly" ];
+    })
+
+    # # You can also create simple shell scripts directly inside your
+    # # configuration. For example, this adds a command 'my-hello' to your
+    # # environment:
+    # (pkgs.writeShellScriptBin "my-hello" ''
+    #   echo "Hello, ${config.home.username}!"
+    # '')
+    (pkgs.writeShellScriptBin "nd" ''
+      mkdir "$1"
+      cd "$1"
+    '')
+    (pkgs.writeShellScriptBin "uq" ''
+      xattr -rdv com.apple.quarantine "/Applications/$1.app"
+    '')
+  ];
+
+  # Home Manager is pretty good at managing dotfiles. The primary way to manage
+  # plain files is through 'home.file'.
+  home.file = {
+    # # Building this configuration will create a copy of 'dotfiles/screenrc' in
+    # # the Nix store. Activating the configuration will then make '~/.screenrc' a
+    # # symlink to the Nix store copy.
+    # ".screenrc".source = dotfiles/screenrc;
+
+    # # You can also set the file content immediately.
+    # ".gradle/gradle.properties".text = ''
+    #   org.gradle.console=verbose
+    #   org.gradle.daemon.idletimeout=3600000
+    # '';
+  };
+
+  # Home Manager can also manage your environment variables through
+  # 'home.sessionVariables'. If you don't want to manage your shell through Home
+  # Manager then you have to manually source 'hm-session-vars.sh' located at
+  # either
+  #
+  #  ~/.nix-profile/etc/profile.d/hm-session-vars.sh
+  #
+  # or
+  #
+  #  /etc/profiles/per-user/millironx/etc/profile.d/hm-session-vars.sh
+  #
+  home.sessionVariables = {
+    EDITOR = "nvim";
+    PAGER = "most";
+    NXF_HOME = "$HOME/.nextflow";
+    NXF_CACHE = "$HOME/.cache/nextflow";
+    NXF_CONDA_CACHEDIR = "$NXF_CACHE/conda";
+    NXF_SINGULARITY_CACHEDIR = "$NXF_CACHE/singularity";
+    JULIA_NUM_THREADS = "$(sysctl -n hw.logicalcpu)";
+    JULIA_PKG_USE_CLI_GIT = "true";
+    GPG_TTY = "$(tty)";
+    SSH_AUTH_SOCK = "$(gpgconf --list-dirs agent-ssh-socket)";
+  };
+
+  home.shellAliases = {
+    cat = "bat";
+    ls = "lsd";
+    code = "codium";
+    nproc = "sysctl -n hw.logicalcpu";
+    please = "sudo $(fc -ln -1)";
+    nrun = ''
+      __NV_PRIME_RENDER_OFFLOAD=1 __GLX_VENDOR_LIBRARY_NAME=nvidia __VK_LAYER_NV_optimus="NVIDIA_only"'';
+    grim = "git rebase -i --autosquash $(git_main_branch)";
+    grid = "git rebase -i --autosquash $(git_develop_branch)";
+    gpub = "git push --set-upstream origin $(git rev-parse --abbrev-ref HEAD)";
+  };
+
+  home.sessionPath = [
+    "$HOME/.julia/bin"
+    "$HOME/.juliaup/bin"
+    "$HOME/.cargo/bin"
+    "$HOME/.local/bin"
+  ];
+
+  # Let Home Manager install and manage itself.
+  programs.home-manager.enable = true;
+
+  programs.bash = {
+    enable = true;
+    initExtra = ''
+      # >>> conda initialize >>>
+      # !! Contents within this block are managed by 'conda init' !!
+      __conda_setup="$($HOME/miniconda3/bin/conda shell.bash 'hook' 2> /dev/null)"
+      if [ $? -eq 0 ]; then
+          eval "$__conda_setup"
+      else
+          if [ -f "$HOME/miniconda3/etc/profile.d/conda.sh" ]; then
+              . "$HOME/miniconda3/etc/profile.d/conda.sh"
+          else
+              export PATH="$HOME/miniconda3/bin:$PATH"
+          fi
+      fi
+      unset __conda_setup
+
+      if [ -f "$HOME/miniconda3/etc/profile.d/mamba.sh" ]; then
+        . "$HOME/miniconda3/etc/profile.d/mamba.sh"
+      fi
+      # <<< conda initialize <<<
+        export PS1="[\[\e[32m\]\u\[\e[m\]@\[\e[33m\]\h\[\e[m\] \[\e[34m\]\W\[\e[m\]] \\$ "
+    '';
+    profileExtra = ''
+      if [ "$(arch)" = "i386" ]; then
+        eval "$(/usr/local/bin/brew shellenv bash)"
+      else
+        eval "$(/opt/homebrew/bin/brew shellenv bash)"
+      fi
+      gpgconf --launch gpg-agent
+    '';
+  };
+  programs.bat = {
+    enable = true;
+    config = { pager = "less -SRF"; };
+  };
+  programs.direnv = {
+    enable = true;
+    enableBashIntegration = true;
+    enableZshIntegration = true;
+  };
+  programs.git = {
+    enable = true;
+    userName = "Thomas A. Christensen II";
+    userEmail = "25492070+MillironX@users.noreply.github.com";
+    signing = {
+      key = "0x073201D703B7C376";
+      signByDefault = true;
+    };
+    extraConfig = {
+      core = { editor = "nvim"; };
+      credential = { helper = "store"; };
+      color = { ui = "auto"; };
+      init = { defaultBranch = "master"; };
+    };
+  };
+  programs.gpg.enable = true;
+  programs.neovim = {
+    enable = true;
+    package = pkgs.neovim-unwrapped;
+    coc.enable = true;
+    plugins = with pkgs.vimPlugins; [
+      mason-nvim
+      mason-lspconfig-nvim
+      nvim-lspconfig
+      nvim-dap
+      nvim-dap-ui
+      null-ls-nvim
+      nvim-lint
+      formatter-nvim
+      lspsaga-nvim
+      vim-slime
+    ];
+    extraLuaConfig = ''
+      require("mason").setup()
+    '';
+  };
+  programs.zsh = {
+    enable = true;
+    autosuggestion.enable = true;
+    enableCompletion = true;
+    completionInit =
+      "autoload -U compinit && compinit; autoload -U bashcompinit && bashcompinit";
+    antidote = {
+      enable = true;
+      plugins = [
+        "ohmyzsh/ohmyzsh path:lib"
+        "ohmyzsh/ohmyzsh path:plugins/git"
+        "ohmyzsh/ohmyzsh path:plugins/extract"
+        "zsh-users/zsh-syntax-highlighting"
+        "zsh-users/zsh-autosuggestions"
+        "zsh-users/zsh-completions"
+        "romkatv/powerlevel10k"
+      ];
+    };
+    initExtraFirst = ''
+      if [[ -r "''${XDG_CACHE_HOME:-$HOME/.cache}/p10k-instant-prompt-''${(%):-%n}.zsh" ]]; then
+        source "''${XDG_CACHE_HOME:-$HOME/.cache}/p10k-instant-prompt-''${(%):-%n}.zsh"
+      fi
+    '';
+    initExtra = ''
+      source ~/.p10k.zsh
+      # >>> conda initialize >>>
+      # !! Contents within this block are managed by 'conda init' !!
+      __conda_setup="$($HOME/miniconda3/bin/conda shell.zsh 'hook' 2> /dev/null)"
+      if [ $? -eq 0 ]; then
+          eval "$__conda_setup"
+      else
+          if [ -f "$HOME/miniconda3/etc/profile.d/conda.sh" ]; then
+              . "$HOME/miniconda3/etc/profile.d/conda.sh"
+          else
+              export PATH="$HOME/miniconda3/bin:$PATH"
+          fi
+      fi
+      unset __conda_setup
+
+      if [ -f "$HOME/miniconda3/etc/profile.d/mamba.sh" ]; then
+        . "$HOME/miniconda3/etc/profile.d/mamba.sh"
+      fi
+      # <<< conda initialize <<<
+      gpgconf --launch gpg-agent
+      source "$HOME/.cargo/env"
+    '';
+    profileExtra = ''
+      if [ "$(arch)" = "i386" ]; then
+        eval "$(/usr/local/bin/brew shellenv zsh)"
+      else
+        eval "$(/opt/homebrew/bin/brew shellenv zsh)"
+      fi
+    '';
+  };
+  services.gpg-agent = {
+    enable = pkgs.hostPlatform.isLinux;
+    enableBashIntegration = true;
+    enableSshSupport = true;
+    enableZshIntegration = true;
+    defaultCacheTtl = 60;
+    maxCacheTtl = 120;
+    #pinentryPackage = pkgs.pinentry-qt;
+  };
+}