https://millironx.com/people/tanja-normark/Recent content in Tanja Normark on MillironXHugo -- gohugo.ioen-usMon, 23 Oct 2023 00:00:00 +0000https://millironx.com/academia/taxprofiler/Mon, 23 Oct 2023 00:00:00 +0000https://millironx.com/academia/taxprofiler/Metagenomic classification tackles the problem of characterising the taxonomic source of all DNA sequencing reads in a sample. A common approach to address the differences and biases between the many different taxonomic classification tools is to run metagenomic data through multiple classification tools and databases. This, however, is a very time-consuming task when performed manually - particularly when combined with the appropriate preprocessing of sequencing reads before the classification. Here we present nf-core/taxprofiler, a highly parallelised read-processing and taxonomic classification pipeline.