From 70c226d0a292c539e9abc0f42e26f1b9c468f259 Mon Sep 17 00:00:00 2001
From: "Thomas A. Christensen II" <25492070+MillironX@users.noreply.github.com>
Date: Wed, 31 Mar 2021 11:12:39 -0600
Subject: [PATCH] Create README.md

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 clearlabs/README.md | 32 ++++++++++++++++++++++++++++++++
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 create mode 100644 clearlabs/README.md

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+# ClearLabs
+
+This script converts the FASTA tarball that is downloaded through the ClearLabs web portal into individual and a collective FASTA file using Cygwin.
+
+## Usage
+
+To be run in Cygwin
+
+```bash
+$ convert-fastas.sh TARBALL
+```
+
+## Installation
+
+This script requires [Cygwin](https://cygwin.com/install.html).
+
+1. Download and install Cygwin
+    1. Select "Just Me" when asked who to install for
+    2. Find and add the latest version of the "git" package when prompted
+    3. All other default options will work
+2. Open the Cygwin console and use the following commands
+
+```bash
+$ git clone https://github.com/MillironX/wphl-bioinformatics.git
+$ cp wphl-bioinformatics/clearlabs/convert-fastas.sh ~
+$ chmod +x convert-fastas.sh
+```
+
+3. Press the Win+R on the keyboard
+4. Type `shell:sendto` and press Enter
+5. Right-click in the newly opened window, and click "New Shortcut"
+