From 9f715bf5cdab157e3497617f6c510d76228155b0 Mon Sep 17 00:00:00 2001
From: "Thomas A. Christensen II" <25492070+MillironX@users.noreply.github.com>
Date: Tue, 13 Apr 2021 13:58:00 -0600
Subject: [PATCH] Cleanup main README

---
 README.md | 32 ++++++++++++++++++++++----------
 1 file changed, 22 insertions(+), 10 deletions(-)

diff --git a/README.md b/README.md
index 9a984f2..6ae427f 100644
--- a/README.md
+++ b/README.md
@@ -2,24 +2,29 @@
 
 Bioinformatics scripts for use at the Wyoming Public Health Laboratory.
 
-These scripts have various purposes, uses, and instructions. The only unifying thing about them is that they were all written for WPHL. Please check the `README` file in each directory for more detailed instructions.
+These scripts have various purposes, uses, and instructions. The only unifying
+thing about them is that they were all written for WPHL. Please check the
+`README` file in each directory for more detailed instructions.
 
 ## Encryption
 
-**NOTICE:** Some files in this repository are encrypted using [git-crypt](https://github.com/AGWA/git-crypt). git-crypt works on a repository-wide basis, meaning that decryption must occur on the entire repository.
+**NOTICE:** Some files in this repository are encrypted using
+[git-crypt](https://github.com/AGWA/git-crypt). git-crypt works on a
+repository-wide basis, meaning that decryption must occur on the entire
+repository.
 
 ### Installing git-crypt
 
 #### Ubuntu, Debian, etc.
 
 ```bash
-$ sudo apt-get install git-crypt -y
+sudo apt-get install git-crypt -y
 ```
 
 #### Fedora, CentOS, RHEL, etc.
 
 ```bash
-$ sudo yum install git-crypt -y
+sudo yum install git-crypt -y
 ```
 
 #### MacOS
@@ -27,22 +32,29 @@ $ sudo yum install git-crypt -y
 Install [Homebrew](https://brew.sh/) first. Then
 
 ```bash
-$ brew install git-crypt
+brew install git-crypt
 ```
 
 #### Windows
 
-There are no official git-crypt builds for Windows. I repeat, **git-crypt does not exist for Windows** regardless of what others may tell you. If possible, you may use the [Windows Subsystem for Linux](https://docs.microsoft.com/en-us/windows/wsl/install-win10), but you cannot use native git-crypt.
+There are no official git-crypt builds for Windows. I repeat, **git-crypt does
+not exist for Windows** regardless of what others may tell you. If possible, you
+may use the [Windows Subsystem for
+Linux](https://docs.microsoft.com/en-us/windows/wsl/install-win10), but you
+cannot use native git-crypt.
 
 ### Decrypting the repository
 
-Encryption is GPG-based. If your GPG key has been added to the repository (you know if you have access), then run
+Encryption is GPG-based. If your GPG key has been added to the repository (you
+know if you have access), then run
 
 ```bash
-$ git clone https://github.com/MillironX/wphl-bioinformatics.git && cd wphl-bioinformatics
-$ git-crypt unlock
+git clone https://github.com/MillironX/wphl-bioinformatics.git && cd wphl-bioinformatics
+git-crypt unlock
 ```
 
 The files will now be decrypted and can be usable.
 
-If you need to copy your GPG keys to a new machine to be able to decrypt the files, follow the instructions at https://www.phildev.net/pgp/gpg_moving_keys.html under "Copy Just Your Keys."
+If you need to copy your GPG keys to a new machine to be able to decrypt the
+files, follow the instructions at
+https://www.phildev.net/pgp/gpg_moving_keys.html under "Copy Just Your Keys."