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CHANGELOG.md
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CHANGELOG.md
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# Changelog
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All notable changes to this project will be documented in this file.
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The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
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and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
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## [Unreleased]
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## [1.0.0] - 2022-06-13
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### Added
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- NodeJS GitHub Action to download and install Nextflow
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- GitHub Actions workflow to test Nextflow installation and downstream usage
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- Documentation and license files
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[unreleased]: https://github.com/MillironX/setup-nextflow/compare/v1.0.0...HEAD
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[1.0.0]: https://github.com/MillironX/setup-nextflow/releases/tag/v1.0.0
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README.md
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# Setup Nextflow for GitHub Actions
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[![Testing](https://github.com/MillironX/setup-nextflow/actions/workflows/example.yml/badge.svg)](https://github.com/MillironX/setup-nextflow/actions/workflows/example.yml)
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[![MIT License](https://img.shields.io/github/license/MillironX/setup-nextflow?logo=opensourceinitiative)](https://github.com/MillironX/setup-nextflow/blob/master/LICENSE)
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[![GitHub tag (latest by date)](https://img.shields.io/github/v/tag/MillironX/setup-nextflow?logo=github)](https://github.com/MillironX/setup-nextflow/releases/latest)
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[![Get from GitHub Actions](https://img.shields.io/static/v1?label=actions&message=marketplace&color=green&logo=githubactions)](https://github.com/marketplace/setup-nextflow)
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An action to install [Nextflow](https://nextflow.io) into a GitHub Actions workflow and make it available for subsequent steps.
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## Quick start
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```yaml
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name: Example workflow
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on: push
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jobs:
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example:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v3
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- uses: actions/setup-java@v3
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with:
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distribution: "temurin"
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java-version: "11"
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- uses: MillironX/setup-nextflow@v1
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with:
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version: "21.10"
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all: false
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token: ${{ secrets.GITHUB_TOKEN }}
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- run: nextflow help
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```
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## Inputs
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### `version`
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> **default: `latest`**
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A version string to specify the version of Nextflow to install. This version number will try to resolve using [npm's semantic versioning](https://github.com/npm/node-semver), so
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- `version: 21`
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- `version: 21.10`
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- `version: 21.10.6`
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will all download Nextflow version 21.10.6 as of 13 June 2022. Since Nextflow does not use true semantic versioning, you should **always** specify at least the minor version (e.g. `version: 21.10`).
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Edge releases are resolved as pre-release, see <https://github.com/npm/node-semver#prerelease-tags> for more details. In short, in nearly all cases, passing an `-edge` release to this action will need to specify the _exact_ edge release targeted.
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There are three (technically four) aliases to assist in choosing up-to-date Nextflow versions.
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- `version: latest-stable` (alias `version: latest`)
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This will download the latest _stable_ release of Nextflow.
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- `version: latest-edge`
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This will download the latest _edge_ release of Nextflow. Note that edge releases may be _older_ than the latest stable release. See https://github.com/nextflow-io/nextflow/issues/2467
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- `version: latest-everything`
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This will download the latest release of Nextflow, regardless of stable/edge status.
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### `all`
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> **default: `false`**
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A boolean deciding whether to download the "all versions" distribution of Nextflow. May be useful for running tests against multiple versions downstream.
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### `token`
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> **default: `${{ secrets.GITHUB_TOKEN }}`**
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This action locates the releases based upon the GitHub API, and requires an access token. The default token provided with all GitHub actions should be sufficient for all use cases.
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## Outputs
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There are no outputs from this action.
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