mirror of
https://github.com/MillironX/setup-nextflow.git
synced 2024-11-22 01:46:04 +00:00
refactor: Move functions functions to their own file
This commit is contained in:
parent
db82c135bd
commit
b9a7fb9499
4 changed files with 107 additions and 97 deletions
96
src/functions.ts
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96
src/functions.ts
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@ -0,0 +1,96 @@
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import * as core from '@actions/core'
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import * as fs from 'fs'
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import retry = require('async-retry')
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import semver = require('semver')
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const NEXTFLOW_REPO = {owner: 'nextflow-io', repo: 'nextflow'}
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async function all_nf_releases(ok) {
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return await ok.paginate(
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ok.rest.repos.listReleases,
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NEXTFLOW_REPO,
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response => response.data
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)
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}
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async function latest_stable_release_data(ok) {
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const {data: stable_release} = await ok.rest.repos.getLatestRelease(
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NEXTFLOW_REPO
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)
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return stable_release
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}
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export async function release_data(version, ok) {
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// Setup tag-based filtering
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let filter = r => {
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return semver.satisfies(r.tag_name, version, true)
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}
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// Check if the user passed a 'latest*' tag, and override filtering
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// accordingly
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if (version.includes('latest')) {
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if (version.includes('-everything')) {
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// No filtering
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filter = r => {
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return true
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}
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} else if (version.includes('-edge')) {
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filter = r => {
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return r.tag_name.endsWith('-edge')
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}
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} else {
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// This is special: passing 'latest' or 'latest-stable' allows us to use
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// the latest stable GitHub release direct from the API
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const stable_release = await latest_stable_release_data(ok)
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return stable_release
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}
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}
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// Get all the releases
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const all_releases = await all_nf_releases(ok)
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let matching_releases = all_releases.filter(filter)
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matching_releases.sort(function (x, y) {
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semver.compare(x.tag_name, y.tag_name, true)
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})
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return matching_releases[0]
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}
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export function nextflow_bin_url(release, get_all) {
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const release_assets = release.assets
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const all_asset = release_assets.filter(a => {
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return a.browser_download_url.endsWith('-all')
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})[0]
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const regular_asset = release_assets.filter(a => {
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return a.name == 'nextflow'
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})[0]
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const dl_asset = get_all ? all_asset : regular_asset
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return dl_asset.browser_download_url
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}
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export async function install_nextflow(url, version) {
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core.debug(`Downloading Nextflow from ${url}`)
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const nf_dl_path = await retry(
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async bail => {
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return await tc.downloadTool(url)
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},
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{
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onRetry: err => {
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core.debug(`Download of ${url} failed, trying again. Error ${err}`)
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}
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}
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)
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const temp_install_dir = fs.mkdtempSync(`nxf-${version}`)
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const nf_path = `${temp_install_dir}/nextflow`
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fs.renameSync(nf_dl_path, nf_path)
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fs.chmodSync(nf_path, '0711')
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return temp_install_dir
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}
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95
src/main.ts
95
src/main.ts
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@ -3,100 +3,7 @@ import * as exec from '@actions/exec'
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import * as fs from 'fs'
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import * as fs from 'fs'
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import * as github from '@actions/github'
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import * as github from '@actions/github'
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import * as tc from '@actions/tool-cache'
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import * as tc from '@actions/tool-cache'
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import retry = require('async-retry')
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import {release_data, nextflow_bin_url, install_nextflow} from './functions'
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import semver = require('semver')
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const NEXTFLOW_REPO = {owner: 'nextflow-io', repo: 'nextflow'}
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async function all_nf_releases(ok) {
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return await ok.paginate(
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ok.rest.repos.listReleases,
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NEXTFLOW_REPO,
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response => response.data
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)
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}
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async function latest_stable_release_data(ok) {
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const {data: stable_release} = await ok.rest.repos.getLatestRelease(
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NEXTFLOW_REPO
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)
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return stable_release
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}
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async function release_data(version, ok) {
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// Setup tag-based filtering
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let filter = r => {
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return semver.satisfies(r.tag_name, version, true)
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}
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// Check if the user passed a 'latest*' tag, and override filtering
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// accordingly
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if (version.includes('latest')) {
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if (version.includes('-everything')) {
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// No filtering
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filter = r => {
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return true
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}
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} else if (version.includes('-edge')) {
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filter = r => {
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return r.tag_name.endsWith('-edge')
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}
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} else {
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// This is special: passing 'latest' or 'latest-stable' allows us to use
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// the latest stable GitHub release direct from the API
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const stable_release = await latest_stable_release_data(ok)
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return stable_release
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}
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}
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// Get all the releases
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const all_releases = await all_nf_releases(ok)
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let matching_releases = all_releases.filter(filter)
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matching_releases.sort(function (x, y) {
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semver.compare(x.tag_name, y.tag_name, true)
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})
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return matching_releases[0]
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}
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function nextflow_bin_url(release, get_all) {
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const release_assets = release.assets
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const all_asset = release_assets.filter(a => {
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return a.browser_download_url.endsWith('-all')
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})[0]
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const regular_asset = release_assets.filter(a => {
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return a.name == 'nextflow'
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})[0]
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const dl_asset = get_all ? all_asset : regular_asset
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return dl_asset.browser_download_url
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}
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async function install_nextflow(url, version) {
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core.debug(`Downloading Nextflow from ${url}`)
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const nf_dl_path = await retry(
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async bail => {
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return await tc.downloadTool(url)
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},
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{
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onRetry: err => {
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core.debug(`Download of ${url} failed, trying again. Error ${err}`)
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}
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}
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)
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const temp_install_dir = fs.mkdtempSync(`nxf-${version}`)
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const nf_path = `${temp_install_dir}/nextflow`
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fs.renameSync(nf_dl_path, nf_path)
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fs.chmodSync(nf_path, '0711')
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return temp_install_dir
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}
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async function run() {
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async function run() {
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// Set environment variables
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// Set environment variables
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7
test/functions.ts
Normal file
7
test/functions.ts
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@ -0,0 +1,7 @@
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import test from 'ava'
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test.todo('all_nf_releases')
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test.todo('lastest_stable_release_data')
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test.todo('release_data')
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test.todo('nextflow_bin_url')
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test.todo('install_nextflow')
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@ -1,8 +1,8 @@
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import test from 'ava';
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import test from 'ava'
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const fn = () => 'foo';
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const fn = () => 'foo'
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test('fn() returns foo', t => {
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test('fn() returns foo', t => {
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t.pass()
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t.pass()
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// t.is(fn(), 'foo');
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// t.is(fn(), 'foo');
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});
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})
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