mirror of
https://github.com/MillironX/singularity-builds.git
synced 2024-10-15 09:04:43 +00:00
28 lines
1.1 KiB
Markdown
28 lines
1.1 KiB
Markdown
|
# minimap2 (plus goodies)
|
||
|
|
||
|
[![Container source](https://img.shields.io/static/v1?label=Container%20Source&message=GitHub&color=lightgrey&logo=github&style=flat-square)](https://github.com/MillironX/singularity-builds/tree/master/minimap_plus)
|
||
|
[![minimap2 source](https://img.shields.io/static/v1?label=minimap2%20Source&message=GitHub&color=lightgrey&logo=github&style=flat-square)](https://github.com/lh3/minimap2)
|
||
|
[![Version 2.22](https://img.shields.io/static/v1?label=Latest%20version&message=2.22&color=yellowgreen&logo=linuxcontainers&style=flat-square)](https://cloud.sylabs.io/library/millironx/default/minimap_plus)
|
||
|
[![Docs](https://img.shields.io/static/v1?label=Docs&message=web&color=blue&style=flat-square)](https://lh3.github.io/minimap2/)
|
||
|
[![Alpine base](https://img.shields.io/static/v1?label=Base%20image&message=Alpine&color=0d597f&logo=alpinelinux&style=flat-square)](https://www.alpinelinux.org/)
|
||
|
|
||
|
Minimap2 is a versatile sequence alignment program that aligns DNA or mRNA sequences against a large reference database.
|
||
|
|
||
|
## Tools installed
|
||
|
|
||
|
### minimap2
|
||
|
|
||
|
- `minimap2`
|
||
|
|
||
|
### samtools
|
||
|
|
||
|
- `samtools`
|
||
|
|
||
|
### Perl
|
||
|
|
||
|
- `perl`
|
||
|
|
||
|
### samclip
|
||
|
|
||
|
- `samclip`
|