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singularity-builds/sniffles/README.md

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Add README for Sniffles
2021-08-10 17:17:18 +00:00
# Sniffles
Overhaul Sniffles README
2021-08-10 18:20:04 +00:00
[![Container source](https://img.shields.io/static/v1?label=Container%20Source&message=GitHub&color=lightgrey&logo=github&style=flat-square)](https://github.com/MillironX/singularity-builds/tree/master/sniffles)
[![Sniffles source](https://img.shields.io/static/v1?label=Sniffles%20Source&message=GitHub&color=lightgrey&logo=github&style=flat-square)](https://github.com/fritzsedlazeck/Sniffles)
Add base image badge to Sniffles README
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[![Version 1.0.12b](https://img.shields.io/static/v1?label=Latest%20version&message=v1.0.12b&color=yellowgreen&logo=linuxcontainers&style=flat-square)](https://cloud.sylabs.io/library/millironx/default/sniffles)
Add README for Sniffles
2021-08-10 17:17:18 +00:00
[![Docs](https://img.shields.io/static/v1?label=Docs&message=wiki&color=blue&style=flat-square)](https://github.com/fritzsedlazeck/Sniffles/wiki)
Correct link in Sniffles README
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[![Debian base](https://img.shields.io/static/v1?label=Base%20image&message=Debian&color=a80030&logo=debian&style=flat-square)](https://www.debian.org/)
Add README for Sniffles
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Sniffles is a structural variation caller using third generation sequencing
(PacBio or Oxford Nanopore). It detects all types of SVs (10bp+) using
evidence from split-read alignments, high-mismatch regions, and coverage
analysis.
Overhaul Sniffles README
2021-08-10 18:20:04 +00:00
## Tools installed
### Sniffles
- `sniffles`
- `sniffles-debug`
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