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19 lines
1.2 KiB
Markdown
19 lines
1.2 KiB
Markdown
# Sniffles
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[](https://github.com/MillironX/singularity-builds/tree/master/sniffles)
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[](https://github.com/fritzsedlazeck/Sniffles)
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[](https://cloud.sylabs.io/library/millironx/default/sniffles)
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[](https://github.com/fritzsedlazeck/Sniffles/wiki)
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[](https://www.alpinelinux.org/)
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Sniffles is a structural variation caller using third generation sequencing
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(PacBio or Oxford Nanopore). It detects all types of SVs (10bp+) using
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evidence from split-read alignments, high-mismatch regions, and coverage
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analysis.
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## Tools installed
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### Sniffles
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- `sniffles`
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- `sniffles-debug`
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