2022-02-18 06:55:14 +00:00
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/*
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2022-03-15 21:05:37 +00:00
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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2022-02-18 06:55:14 +00:00
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Nextflow config file for running full-size tests
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2022-03-15 21:05:37 +00:00
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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2022-02-18 06:55:14 +00:00
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Defines input files and everything required to run a full size pipeline test.
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Use as follows:
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2022-03-15 21:05:37 +00:00
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nextflow run nf-core/taxprofiler -profile test_full,<docker/singularity> --outdir <OUTDIR>
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2022-02-18 06:55:14 +00:00
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----------------------------------------------------------------------------------------
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*/
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params {
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config_profile_name = 'Full test profile'
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config_profile_description = 'Full test dataset to check pipeline function'
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// Input data for full size test
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// TODO nf-core: Specify the paths to your full test data ( on nf-core/test-datasets or directly in repositories, e.g. SRA)
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// TODO nf-core: Give any required params for the test so that command line flags are not needed
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input = 'https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/samplesheet/samplesheet_full_illumina_amplicon.csv'
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// Genome references
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genome = 'R64-1-1'
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}
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