diff --git a/docs/usage.md b/docs/usage.md index 3ab6237..ead0ea2 100644 --- a/docs/usage.md +++ b/docs/usage.md @@ -413,6 +413,6 @@ NXF_OPTS='-Xms1g -Xmx4g' ## Troubleshooting and FAQs -### I get a warning during centrifuge_kreport process when running taxprofiler on a minimal dataset. +### I get a warning during centrifuge_kreport process with exit status 255. When a sample has no hits, `centrifuge` classifier exits with exit code `255`. The pipeline does not fail and this is provided as a `WARN`.