millironx/taxprofiler
1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-22 03:49:55 +00:00
Code Issues Releases Packages Activity

Use new resources for test data

Browse source
This commit is contained in:
James Fellows Yates 2022-03-28 20:38:16 +02:00
parent 94e5cfef4a
commit 04fb6f4127
1 changed files with 1 additions and 14 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

15
conf/test.config
View file

@ -15,7 +15,7 @@ params {
config_profile_description = 'Minimal test dataset to check pipeline function'
// Limit resources so that this can run on GitHub Actions
max_cpus = 8
max_cpus = 2
max_memory = '6.GB'
max_time = '6.h'
@ -29,16 +29,3 @@ params {
shortread_clipmerge = true
}
process {
withName: FASTQC {
cpus = { check_max( 8 * task.attempt, 'cpus' ) }
memory = { check_max( 6.GB * task.attempt, 'memory' ) }
time = { check_max( 6.h * task.attempt, 'time' ) }
}
withName: FASTQC_PROCESSED {
cpus = { check_max( 8 * task.attempt, 'cpus' ) }
memory = { check_max( 6.GB * task.attempt, 'memory' ) }
time = { check_max( 6.h * task.attempt, 'time' ) }
}
}