diff --git a/subworkflows/local/db_check.nf b/subworkflows/local/db_check.nf index 641108d..890e373 100644 --- a/subworkflows/local/db_check.nf +++ b/subworkflows/local/db_check.nf @@ -19,12 +19,11 @@ workflow DB_CHECK { .map { create_db_channels(it) } .dump(tag: "db_channel_prepped") - parsed_samplesheet + ch_dbs_for_untar = parsed_samplesheet .branch { untar: it[1].toString().endsWith(".tar.gz") skip: true } - .set{ ch_dbs_for_untar } // TODO Filter to only run UNTAR on DBs of tools actually using? // TODO make optional whether to save