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Add additional test
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6
.github/workflows/ci.yml
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6
.github/workflows/ci.yml
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@ -28,6 +28,10 @@ jobs:
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# Test latest edge release of Nextflow
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# Test latest edge release of Nextflow
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- NXF_VER: ""
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- NXF_VER: ""
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NXF_EDGE: "1"
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NXF_EDGE: "1"
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parameters:
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- "--shortread_clipmerge_tool fastp"
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- "--shortread_clipmerge_tool adapterremoval"
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steps:
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steps:
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- name: Check out pipeline code
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- name: Check out pipeline code
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uses: actions/checkout@v2
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uses: actions/checkout@v2
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@ -47,6 +51,6 @@ jobs:
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# For example: adding multiple test runs with different parameters
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# For example: adding multiple test runs with different parameters
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# Remember that you can parallelise this by using strategy.matrix
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# Remember that you can parallelise this by using strategy.matrix
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run: |
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run: |
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nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results
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nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results ${{ matrix.parameters }}
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#
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#
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