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Add additional test

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This commit is contained in:
James Fellows Yates 2022-04-01 11:19:00 +02:00
parent df4f13319f
commit 0d0b377dfb
1 changed files with 5 additions and 1 deletions
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6
.github/workflows/ci.yml vendored
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@ -28,6 +28,10 @@ jobs:
# Test latest edge release of Nextflow # Test latest edge release of Nextflow
- NXF_VER: "" - NXF_VER: ""
NXF_EDGE: "1" NXF_EDGE: "1"
parameters:
- "--shortread_clipmerge_tool fastp"
- "--shortread_clipmerge_tool adapterremoval"
steps: steps:
- name: Check out pipeline code - name: Check out pipeline code
uses: actions/checkout@v2 uses: actions/checkout@v2
@ -47,6 +51,6 @@ jobs:
# For example: adding multiple test runs with different parameters # For example: adding multiple test runs with different parameters
# Remember that you can parallelise this by using strategy.matrix # Remember that you can parallelise this by using strategy.matrix
run: | run: |
nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results nextflow run ${GITHUB_WORKSPACE} -profile test,docker --outdir ./results ${{ matrix.parameters }}
# #