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Update ci.yml

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James A. Fellows Yates 2022-09-02 10:06:20 +02:00 committed by GitHub
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commit 176a0a6280
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6
.github/workflows/ci.yml vendored
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@ -23,14 +23,8 @@ jobs:
- "21.10.3" - "21.10.3"
- "latest-everything" - "latest-everything"
parameters: parameters:
- "--perform_longread_qc false"
- "--perform_shortread_qc false"
- "--shortread_qc_tool fastp"
- "--shortread_qc_tool fastp --shortread_qc_mergepairs --shortread_qc_excludeunmerged" - "--shortread_qc_tool fastp --shortread_qc_mergepairs --shortread_qc_excludeunmerged"
- "--shortread_qc_tool fastp --shortread_qc_mergepairs"
- "--shortread_qc_tool adapterremoval"
- "--shortread_qc_tool adapterremoval --shortread_qc_mergepairs --shortread_qc_excludeunmerged" - "--shortread_qc_tool adapterremoval --shortread_qc_mergepairs --shortread_qc_excludeunmerged"
- "--shortread_qc_tool adapterremoval --shortread_qc_mergepairs"
- "--shortread_complexityfilter_tool bbduk" - "--shortread_complexityfilter_tool bbduk"
- "--shortread_complexityfilter_tool prinseqplusplus" - "--shortread_complexityfilter_tool prinseqplusplus"
- "--perform_runmerging" - "--perform_runmerging"