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Update ci.yml
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6
.github/workflows/ci.yml
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6
.github/workflows/ci.yml
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@ -23,14 +23,8 @@ jobs:
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- "21.10.3"
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- "21.10.3"
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- "latest-everything"
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- "latest-everything"
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parameters:
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parameters:
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- "--perform_longread_qc false"
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- "--perform_shortread_qc false"
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- "--shortread_qc_tool fastp"
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- "--shortread_qc_tool fastp --shortread_qc_mergepairs --shortread_qc_excludeunmerged"
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- "--shortread_qc_tool fastp --shortread_qc_mergepairs --shortread_qc_excludeunmerged"
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- "--shortread_qc_tool fastp --shortread_qc_mergepairs"
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- "--shortread_qc_tool adapterremoval"
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- "--shortread_qc_tool adapterremoval --shortread_qc_mergepairs --shortread_qc_excludeunmerged"
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- "--shortread_qc_tool adapterremoval --shortread_qc_mergepairs --shortread_qc_excludeunmerged"
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- "--shortread_qc_tool adapterremoval --shortread_qc_mergepairs"
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- "--shortread_complexityfilter_tool bbduk"
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- "--shortread_complexityfilter_tool bbduk"
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- "--shortread_complexityfilter_tool prinseqplusplus"
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- "--shortread_complexityfilter_tool prinseqplusplus"
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- "--perform_runmerging"
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- "--perform_runmerging"
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