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Start fixing FastQC/Falco display in MultiQC
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parent
a5138ed6e0
commit
1f1c63bb51
1 changed files with 20 additions and 4 deletions
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@ -39,6 +39,10 @@ sp:
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diamond:
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contents: "diamond v"
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num_lines: 10
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fastqc/data:
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fn_re: ".*[fastqc|falco]_data.txt"
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fastqc/zip:
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fn: "*_fastqc.zip"
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#extra_fn_clean_exts:
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# - '_fastp'
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@ -49,11 +53,17 @@ top_modules:
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- "fastqc":
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name: "FastQC (pre-Trimming)"
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path_filters:
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- "*raw_*fastqc.zip"
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- "*raw*"
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path_filters_exclude:
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- "*falco*"
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- "*processed*"
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- "fastqc":
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name: "Falco (pre-Trimming)"
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path_filters:
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- "*_raw_falco_*_report.html"
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- "*raw*"
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- "*[falco]*"
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path_filters_exclude:
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- "*processed*"
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- "fastp"
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- "adapterRemoval"
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- "porechop":
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@ -61,11 +71,17 @@ top_modules:
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- "fastqc":
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name: "FastQC (post-Trimming)"
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path_filters:
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- "*_processed_*fastqc.zip"
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- "*processed*"
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path_filters_exclude:
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- "*falco*"
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- "*raw*"
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- "fastqc":
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name: "Falco (post-Trimming)"
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path_filters:
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- "*_processed_falco_*_report.html"
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- "*processed*"
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- "*falco*"
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path_filters_exclude:
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- "*raw*"
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- "bbduk"
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- "prinseqplusplus"
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- "filtlong"
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