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Merge pull request #238 from nf-core/process-optmisations

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Resource optimisation
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James A. Fellows Yates 2023-02-09 15:41:30 +01:00 committed by GitHub
commit 21d9135b14
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1 changed files with 6 additions and 1 deletions
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7
conf/base.config
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@ -28,7 +28,7 @@ process {
// See https://www.nextflow.io/docs/latest/config.html#config-process-selectors
withLabel:process_single {
cpus = { check_max( 1 , 'cpus' ) }
memory = { check_max( 6.GB * task.attempt, 'memory' ) }
memory = { check_max( 1.GB * task.attempt, 'memory' ) }
time = { check_max( 4.h * task.attempt, 'time' ) }
}
withLabel:process_low {
@ -62,4 +62,9 @@ process {
withName:CUSTOM_DUMPSOFTWAREVERSIONS {
cache = false
}
withName: RMA2INFO {
cpus = { check_max( 1 , 'cpus' ) }
memory = { check_max( 6.GB * task.attempt, 'memory' ) }
time = { check_max( 4.h * task.attempt, 'time' ) }
}
}