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Update longread_preprocessing.nf
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parent
171258d545
commit
237e9aa623
1 changed files with 2 additions and 2 deletions
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@ -30,7 +30,7 @@ workflow LONGREAD_PREPROCESSING {
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ch_processed_reads = FILTLONG ( reads.map{ meta, reads -> [meta, [], reads ]} )
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ch_processed_reads = FILTLONG ( reads.map{ meta, reads -> [meta, [], reads ]} )
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ch_versions = ch_versions.mix(FILTLONG.out.versions.first())
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ch_versions = ch_versions.mix(FILTLONG.out.versions.first())
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ch_multiqc_files = ch_multiqc_files.mix( FILTLONG.out.log.collect{it[1]}.ifEmpty([]))
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ch_multiqc_files = ch_multiqc_files.mix( FILTLONG.out.log )
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} else {
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} else {
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PORECHOP ( reads )
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PORECHOP ( reads )
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@ -46,7 +46,7 @@ workflow LONGREAD_PREPROCESSING {
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ch_versions = ch_versions.mix(PORECHOP.out.versions.first())
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ch_versions = ch_versions.mix(PORECHOP.out.versions.first())
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ch_versions = ch_versions.mix(FILTLONG.out.versions.first())
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ch_versions = ch_versions.mix(FILTLONG.out.versions.first())
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ch_multiqc_files = ch_multiqc_files.mix( FILTLONG.out.log.collect{it[1]}.ifEmpty([]))
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ch_multiqc_files = ch_multiqc_files.mix( FILTLONG.out.log )
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}
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}
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