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Update CI tests
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.github/workflows/ci.yml
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.github/workflows/ci.yml
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@ -39,6 +39,7 @@ jobs:
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- "--shortread_clipmerge_tool adapterremoval --shortread_clipmerge_mergepairs"
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- "--shortread_clipmerge_tool adapterremoval --shortread_clipmerge_mergepairs"
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- "--shortread_complexityfilter_tool bbduk"
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- "--shortread_complexityfilter_tool bbduk"
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- "--shortread_complexityfilter_tool prinseq"
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- "--shortread_complexityfilter_tool prinseq"
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- "--shortread_complexityfilter false --shortread_hostremoval"
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steps:
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steps:
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- name: Check out pipeline code
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- name: Check out pipeline code
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