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@ -388,7 +388,7 @@ process {
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mode: params.publish_dir_mode,
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pattern: '*.fq.gz',
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enabled: params.save_analysis_ready_fastqs,
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saveAs: { ( !params.perform_runmerging || params.perform_runmerging && !meta.is_multirun ) && params.perform_longread_hostremoval && params.save_analysis_ready_fastqs ? it : null }
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saveAs: { ( params.perform_runmerging == false || params.perform_runmerging && !meta.is_multirun ) && params.perform_longread_hostremoval && params.save_analysis_ready_fastqs ? it : null }
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]
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]
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}
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