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Merge pull request #203 from nf-core/kraken-uniq-bump

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Bump KrakenUniq version
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James A. Fellows Yates 2022-12-20 21:51:18 +01:00 committed by GitHub
commit 361700550e
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2 changed files with 4 additions and 4 deletions
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2
modules.json
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@ -118,7 +118,7 @@
}, },
"krakenuniq/preloadedkrakenuniq": { "krakenuniq/preloadedkrakenuniq": {
"branch": "master", "branch": "master",
"git_sha": "05649975c6611c6e007537a7984e186e12ae03af", "git_sha": "a6eb17f65b3ee5761c25c075a6166c9f76733cee",
"installed_by": ["modules"] "installed_by": ["modules"]
}, },
"krona/ktimporttaxonomy": { "krona/ktimporttaxonomy": {

6
modules/nf-core/krakenuniq/preloadedkrakenuniq/main.nf generated
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@ -2,10 +2,10 @@ process KRAKENUNIQ_PRELOADEDKRAKENUNIQ {
tag "$meta.id" tag "$meta.id"
label 'process_high' label 'process_high'
conda (params.enable_conda ? "bioconda::krakenuniq=1.0.0" : null) conda "bioconda::krakenuniq=1.0.2"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/krakenuniq:1.0.0--pl5321h19e8d03_0': 'https://depot.galaxyproject.org/singularity/krakenuniq:1.0.2--pl5321h19e8d03_0':
'quay.io/biocontainers/krakenuniq:1.0.0--pl5321h19e8d03_0' }" 'quay.io/biocontainers/krakenuniq:1.0.2--pl5321h19e8d03_0' }"
input: input:
tuple val(meta), path(fastqs) tuple val(meta), path(fastqs)