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Merge pull request #175 from nf-core/schema-clean
Fix schema location ofr fastqc/falco option
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commit
3d949a803f
1 changed files with 9 additions and 10 deletions
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@ -56,6 +56,14 @@
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"description": "Common options across both long and short read preprocessing QC steps",
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"default": "",
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"properties": {
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"preprocessing_qc_tool": {
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"type": "string",
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"default": "fastqc",
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"enum": ["fastqc", "falco"],
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"help_text": "Falco is designed as a drop-in replacement for FastQC but written in C++ for faster computation. We particularly recommend using falco when using long reads (due to reduced memory constraints), however is also applicable for short reads.",
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"description": "Specify the tool used for quality control of raw sequencing reads",
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"fa_icon": "fas fa-tools"
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},
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"save_preprocessed_reads": {
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"type": "boolean",
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"fa_icon": "fas fa-save",
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@ -724,14 +732,5 @@
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{
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"$ref": "#/definitions/reference_genome_options"
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}
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],
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"properties": {
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"preprocessing_qc_tool": {
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"type": "string",
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"default": "fastqc",
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"enum": ["fastqc", "falco"],
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"help_text": "Falco is designed as a drop-in replacement for FastQC but written in C++ for faster computation. We particularly recommend using falco when using long reads (due to reduced memory constraints), however is also applicable for short reads.",
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"description": "Specify the tool used for quality control of raw sequencing reads"
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}
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}
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]
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}
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