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Fix file name output clashing wiht multiqc

This commit is contained in:
James Fellows Yates 2022-07-13 15:25:58 +02:00
parent 31119f83c2
commit 449b6a5553

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@ -391,6 +391,7 @@ process {
} }
withName: MOTUS_PROFILE { withName: MOTUS_PROFILE {
ext.prefix = params.perform_runmerging ? { "${meta.id}-${meta.db_name}" } : { "${meta.id}-${meta.run_accession}-${meta.db_name}" }
publishDir = [ publishDir = [
path: { "${params.outdir}/motus/${meta.db_name}" }, path: { "${params.outdir}/motus/${meta.db_name}" },
mode: params.publish_dir_mode mode: params.publish_dir_mode