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Update path to samplesheet

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This commit is contained in:
James Fellows Yates 2022-03-23 10:06:01 +01:00
parent 358b89a4c6
commit 48b6ef508d
1 changed files with 1 additions and 2 deletions
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conf/test.config
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@ -24,8 +24,7 @@ params {
// TODO nf-core: Give any required params for the test so that command line flags are not needed // TODO nf-core: Give any required params for the test so that command line flags are not needed
input = 'https://raw.githubusercontent.com/nf-core/test-datasets/taxprofiler/samplesheet.csv' input = 'https://raw.githubusercontent.com/nf-core/test-datasets/taxprofiler/samplesheet.csv'
outdir = "./results" outdir = "./results"
// TODO replace with official once ready databases = 'https://raw.githubusercontent.com/nf-core/nf-core-test-datasets/taxprofiler/database.csv'
databases = 'https://raw.githubusercontent.com/jfy133/nf-core-test-datasets/taxprofiler/database.csv'
run_kraken2 = true run_kraken2 = true
run_malt = true run_malt = true
shortread_clipmerge = true shortread_clipmerge = true