mirror of
https://github.com/MillironX/taxprofiler.git
synced 2024-11-10 23:13:09 +00:00
Remove unnecessary extra point
This commit is contained in:
parent
f6fe26de46
commit
4940ec57ff
1 changed files with 1 additions and 2 deletions
|
@ -30,11 +30,10 @@ On release, automated continuous integration tests run the pipeline on a full-si
|
|||
|
||||
1. Read QC ([`FastQC`](https://www.bioinformatics.babraham.ac.uk/projects/fastqc/))
|
||||
2. Performs optional read pre-processing
|
||||
- Adapter clipping and merging
|
||||
- Adapter clipping and merging (short, and nanopore reads)
|
||||
- Low complexity filtering
|
||||
- Host read removal
|
||||
- Run merging
|
||||
- Adapter and quality trimming of Nanopore reads
|
||||
3. Performs taxonomic profiling a choice of:
|
||||
- Kraken2
|
||||
- MetaPhlAn3
|
||||
|
|
Loading…
Reference in a new issue