From 55d7919fa7befebebb673bdaf3352e842be44a73 Mon Sep 17 00:00:00 2001 From: James Fellows Yates Date: Fri, 2 Sep 2022 11:48:57 +0200 Subject: [PATCH] Revert "Update ci.yml" This reverts commit 176a0a6280b03c63d90b9fdbf8b1843d28421aee. --- .github/workflows/ci.yml | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 8268d52..2641adb 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -23,8 +23,14 @@ jobs: - "21.10.3" - "latest-everything" parameters: + - "--perform_longread_qc false" + - "--perform_shortread_qc false" + - "--shortread_qc_tool fastp" - "--shortread_qc_tool fastp --shortread_qc_mergepairs --shortread_qc_excludeunmerged" + - "--shortread_qc_tool fastp --shortread_qc_mergepairs" + - "--shortread_qc_tool adapterremoval" - "--shortread_qc_tool adapterremoval --shortread_qc_mergepairs --shortread_qc_excludeunmerged" + - "--shortread_qc_tool adapterremoval --shortread_qc_mergepairs" - "--shortread_complexityfilter_tool bbduk" - "--shortread_complexityfilter_tool prinseqplusplus" - "--perform_runmerging"