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Fix staging

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This commit is contained in:
James Fellows Yates 2023-05-11 15:04:37 +02:00
parent e8b85d0b62
commit 5d95151f54
1 changed files with 3 additions and 1 deletions
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4
subworkflows/local/standardisation_profiles.nf
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@ -33,7 +33,9 @@ workflow STANDARDISATION_PROFILES {
.groupTuple ()
.map { [ it[0], it[1].flatten() ] }
TAXPASTA_MERGE (ch_input_for_taxpasta, params.taxpasta_taxonomy_dir ? params.taxpasta_taxonomy_dir : [], [])
ch_taxpasta_tax_dir = params.taxpasta_taxonomy_dir ? Channel.fromPath(params.taxpasta_taxonomy_dir, checkIfExists: true).collect() : []
TAXPASTA_MERGE (ch_input_for_taxpasta, ch_taxpasta_tax_dir, [])
/*
Split profile results based on tool they come from