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Remove platform specificity for MALT
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@ -67,7 +67,6 @@ workflow PROFILING {
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// MALT: We groupTuple to have all samples in one channel for MALT as database
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// MALT: We groupTuple to have all samples in one channel for MALT as database
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// loading takes a long time, so we only want to run it once per database
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// loading takes a long time, so we only want to run it once per database
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ch_input_for_malt = ch_input_for_profiling.malt
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ch_input_for_malt = ch_input_for_profiling.malt
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.filter { it[0]['instrument_platform'] == 'ILLUMINA' }
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.map {
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.map {
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meta, reads, db_meta, db ->
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meta, reads, db_meta, db ->
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