millironx/taxprofiler
1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-09-21 04:42:04 +00:00
Code Issues Releases Packages Activity

Revert "Update subworkflows/local/profiling.nf"

Browse source 
This reverts commit b7d0557ee0.
This commit is contained in:
James Fellows Yates 2022-04-20 09:23:38 +02:00
parent b7d0557ee0
commit 60d232d62c
1 changed files with 1 additions and 3 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

4
subworkflows/local/profiling.nf
View file

@ -76,9 +76,7 @@ workflow PROFILING {
ch_input_for_centrifuge = ch_input_for_profiling.centrifuge
.filter{
if (it[0].is_fasta) {
WorkflowTaxprofiler.logMessage("Centrifuge currently does not accept FASTA files as input. Skipping Centrifuge for sample ${it[0].id}.", log)
}
if (it[0].is_fasta) log.warn "[nf-core/taxprofiler] Centrifuge currently does not accept FASTA files as input. Skipping Centrifuge for sample " + it[0].id
!it[0].is_fasta
}
.multiMap {