diff --git a/conf/test_motus.config b/conf/test_motus.config index d5eb8f8..d167b94 100644 --- a/conf/test_motus.config +++ b/conf/test_motus.config @@ -33,6 +33,7 @@ params { hostremoval_reference = 'https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/genomics/homo_sapiens/genome/genome.fasta' run_kaiju = false run_kraken2 = false + run_bracken = false run_malt = false run_metaphlan3 = false run_centrifuge = false diff --git a/nextflow.config b/nextflow.config index 4f32a00..24ccab3 100644 --- a/nextflow.config +++ b/nextflow.config @@ -117,7 +117,7 @@ params { kraken2_save_minimizers = false // Bracken - run_bracken = true + run_bracken = false // centrifuge run_centrifuge = false