diff --git a/subworkflows/local/profiling.nf b/subworkflows/local/profiling.nf index 858d3aa..0f9951e 100644 --- a/subworkflows/local/profiling.nf +++ b/subworkflows/local/profiling.nf @@ -272,7 +272,7 @@ workflow PROFILING { ch_versions = ch_versions.mix( KAIJU_KAIJU.out.versions.first() ) ch_raw_classifications = ch_raw_classifications.mix( KAIJU_KAIJU.out.results ) - KAIJU_KAIJU2TABLE_SINGLE ( KAIJU_KAIJU_SINGLE.out.results, ch_input_for_kaiju.db, params.kaiju_taxon_rank) + KAIJU_KAIJU2TABLE_SINGLE ( KAIJU_KAIJU.out.results, ch_input_for_kaiju.db, params.kaiju_taxon_rank) ch_versions = ch_versions.mix( KAIJU_KAIJU2TABLE_SINGLE.out.versions ) ch_multiqc_files = ch_multiqc_files.mix( KAIJU_KAIJU2TABLE_SINGLE.out.summary ) ch_raw_profiles = ch_raw_profiles.mix( KAIJU_KAIJU2TABLE_SINGLE.out.summary )