From 70862570e0334e0af3a039fe790158f57c88b86d Mon Sep 17 00:00:00 2001 From: "Moritz E. Beber" Date: Sat, 2 Apr 2022 14:58:07 +0200 Subject: [PATCH] fix: use same naming scheme --- conf/modules.config | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/conf/modules.config b/conf/modules.config index 5dfaa82..37b1f2f 100644 --- a/conf/modules.config +++ b/conf/modules.config @@ -172,11 +172,11 @@ process { withName: METAPHLAN3 { publishDir = [ - path: { "${params.outdir}/metaphlan3/${metaphlan_db.simpleName}" }, + path: { "${params.outdir}/metaphlan3/${meta.db_name}" }, mode: params.publish_dir_mode, pattern: '*.{biom,txt}' ] - ext.prefix = { "${meta.id}-${meta.run_accession}-${metaphlan_db.simpleName}" } + ext.prefix = { "${meta.id}-${meta.run_accession}-${meta.db_name}" } } withName: CUSTOM_DUMPSOFTWAREVERSIONS {