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Code Issues Releases Packages Activity

Logical ordering and improved commenting

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This commit is contained in:
James Fellows Yates 2023-03-17 22:38:05 +01:00
parent 68d131af34
commit 74bc6b7dd3
1 changed files with 6 additions and 4 deletions
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10
subworkflows/local/input_check.nf
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@ -23,16 +23,16 @@ workflow INPUT_CHECK {
.map {
sample, rows ->
def is_multirun = rows.size() > 1
[ is_multirun, rows ]
[ rows, is_multirun ]
}
.transpose(by: 1)
.transpose(by: 0)
.map {
is_multirun, row ->
row, is_multirun ->
row['is_multirun'] = is_multirun
return row
}
// Split for context-dependent channel generation
ch_parsed_samplesheet = ch_split_samplesheet
.branch { row ->
fasta: row.fasta != ''
@ -40,8 +40,10 @@ workflow INPUT_CHECK {
fastq: true
}
// Channel generation
ch_fastq = ch_parsed_samplesheet.fastq
.map { create_fastq_channel(it) }
.dump(tag: "boop")
ch_nanopore = ch_parsed_samplesheet.nanopore
.map { create_fastq_channel(it) }